Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831524.1_cds_XP_016504562.1_17993
CDS Infomation

[gene=LOC107822519] [db_xref=GeneID:107822519] [protein=kelch-like protein 1] [protein_id=XP_016504562.1] [location=join(24423..24552,24731..24912,25014..25598,25679..25756,27091..27409,27497..27696,28241..28317,28608..28709,28928..29114,29257..29355)] [gbkey=CDS]
Sequence

ATGGTAGCATCATCAAACCAGGCAAACAATGCTAGAGGCTTTAGAAACTTGAGTAGAAGT
CAGCTTGGAGGCGTTATATTTGGTTGCAAGAATAACACGATGAGAGAGTGTCTCTCGAAA
CAACTATTTGGTTTGCCTATTCAACATTTTTCCTTTGTGAAGAATATAGATCCAGGCTTG
CCATTATTTTTGTTCAACTACAGCGATAGAAAGCTTTACGGCGTCTATGAGGCTGCAGGC
TCTGGTCAAATGTATATCGATCAATATGCTTGGACGTCAGATGGTTCTTTCAAAACTCAA
TTTCCTGCGCAGGTTCAAATACGTGTACGTCTGCAATGTCAACCGCTGCTAGAAAGTCAG
TTTAAGCCATTAATTATGGATAACTATTATAGTCAGAACCATTTCTGCTATGAGTTAGAT
CATGTTCAAGCCGGTAAATTGATCTCCAAGCTCTCGTCTCTTGCATATACTCCAAGTAGT
AGTCCATTACAAAACTCAGCAAAACAGAGAAGTATAATCCTAGGTTTACCTGCCAATGAC
AAAAGAGAGGAAAATGGGTGTTTTAAGTCGCAAGAGTTAGAAGATATTTTTGCCTACTCA
TCTGGTTTGAATGGGAAATTGGGGGCTACAGACACTTCTCTACATTCAAATGGTATCCAG
CAGCCAGATAATCAGGCAGAATTGGATGAGAAGGATCTTATATACATAAAACTTAAAGAA
TTGGCCCTTCAGCGGGAATTCTCAAGTGGCATTACAAATGAGCCTTCAGAGGAAACCACC
AATGCTTTCTTATCTCCGTCTATAAATGACGCAATCATTGGGCAAGAAACTTTGCAGGAA
GAGCAGAATATAGGCTGCTCTTATGACTCAACTGGTTATCCATCTGTTATAGCTCAGCTT
CTTCAAGGAATAGAAGAACTGAAAGCTTTTAAGGAAGAGCACATTCATAAGGTGGATAAT
TTGGAGCGGAAGCTGGCTTATGCAGAACAAGAGATTGCTCAGTTAAAATATAAATGTATG
ATGCTGGAATCCTCAAATACTGTTTGTGCACGTGCCGATGAAATGATGATTGACTGCAAT
GATGATGTACACCTGAAGCATGGGTCGATTTTCCTTGCTGGAGGATATGATGGTGTATCA
TGGTTATCAGCTTTGGACTCGTATATGCCTTCACTTGATGTGTTAAAGTCACTTAAACCA
ATGAATTCAGTTCGTGCATATGCGTCAGTTGCAAAGCTGAGTGGAGAACTTTATGTATTT
GGTGGTGGAACTGGAAGCTTGTGGTACGATACAGTTGAATCATATAACCCAGTTGATAAT
AAGTGGACTCAGTGCCCTTCTCTGAAAGAGAAAAAGGGTAGCTTAGCTGGTGCTGCTTTG
AAGGACAAAATATTTGTGCTTGGTGGTGGAAATGGGATTGAATGCTTTTCAGAGGTTGAA
ATGTATGATCCTCAAGTAGGACGATGGATGAATACACAATCCATGTTGCTGAAGAGATTT
GCTCTTGCTGCAGCAGAAATCAATGGTGCATTATATGCTGTTGGTGGGTATGATGGAAGC
AATTACCTGGCGACTGCTGAAAGATTTGATCCCAGAGAACATTCCTGGACAAAAATTGCA
AGTATGAACACAAAGAGAGGATGCCATGCGTTGGTCGCCTTGAGTGGAAAGTTATATGCA
GTTGGTGGCTATGATGGATCTACAATGGTACCAAGCATTGAGATATATGACCCCCGTCTG
GAGACATGGATGATTGGAGAGCCAATGAACCATTCAAGGGGGTATTCAGCTGCTGCTGTT
CTAAAGGAATCCATCTATGTAATTGGAGGGGTTCAATCCAATGAGGAGATAGTAGATGTG
ATTGAATGTTATAAGGAGGGTAAAGGTTGGCAAACACCTAACTTGAGGGCTATCGGGAAA
AGGTGTTTTTCCTCAGCTATAGTTTTAGACGAATGCTGA

Peptide Sequence

PEP ID

XP_016504562.1
PEP Infomation

PREDICTED: kelch-like protein 1 [Nicotiana tabacum]
Sequence

MVASSNQANNARGFRNLSRSQLGGVIFGCKNNTMRECLSKQLFGLPIQHFSFVKNIDPGL
PLFLFNYSDRKLYGVYEAAGSGQMYIDQYAWTSDGSFKTQFPAQVQIRVRLQCQPLLESQ
FKPLIMDNYYSQNHFCYELDHVQAGKLISKLSSLAYTPSSSPLQNSAKQRSIILGLPAND
KREENGCFKSQELEDIFAYSSGLNGKLGATDTSLHSNGIQQPDNQAELDEKDLIYIKLKE
LALQREFSSGITNEPSEETTNAFLSPSINDAIIGQETLQEEQNIGCSYDSTGYPSVIAQL
LQGIEELKAFKEEHIHKVDNLERKLAYAEQEIAQLKYKCMMLESSNTVCARADEMMIDCN
DDVHLKHGSIFLAGGYDGVSWLSALDSYMPSLDVLKSLKPMNSVRAYASVAKLSGELYVF
GGGTGSLWYDTVESYNPVDNKWTQCPSLKEKKGSLAGAALKDKIFVLGGGNGIECFSEVE
MYDPQVGRWMNTQSMLLKRFALAAAEINGALYAVGGYDGSNYLATAERFDPREHSWTKIA
SMNTKRGCHALVALSGKLYAVGGYDGSTMVPSIEIYDPRLETWMIGEPMNHSRGYSAAAV
LKESIYVIGGVQSNEEIVDVIECYKEGKGWQTPNLRAIGKRCFSSAIVLDEC

Transcript Sequence

Gene sequence data has not been registered.